在复现transformer的代码时,在数据预处理部分 函数pickle.dump(data, open(opt.save_data, 'wb'))报错
Traceback (most recent call last):
File "preprocess.py", line 344, in <module>
main_wo_bpe()
File "preprocess.py", line 336, in main_wo_bpe
pickle.dump(data, open(opt.save_data, 'wb'))
AttributeError: Can't pickle local object 'main_wo_bpe.<locals>.tokenize_src'
''' Handling the data io '''
import os
import argparse
import logging
import dill as pickle
import dill
import urllib
from tqdm import tqdm
import sys
import pickle
import codecs
import spacy
import torch
import tarfile
import torchtext.data
import torchtext.datasets
from torchtext.datasets import TranslationDataset
import transformer.Constants as Constants
from learn_bpe import learn_bpe
from apply_bpe import BPE
__author__ = "Yu-Hsiang Huang"
_TRAIN_DATA_SOURCES = [
{"url": "http://data.statmt.org/wmt17/translation-task/" \
"training-parallel-nc-v12.tgz",
"trg": "news-commentary-v12.de-en.en",
"src": "news-commentary-v12.de-en.de"},
#{"url": "http://www.statmt.org/wmt13/training-parallel-commoncrawl.tgz",
# "trg": "commoncrawl.de-en.en",
# "src": "commoncrawl.de-en.de"},
#{"url": "http://www.statmt.org/wmt13/training-parallel-europarl-v7.tgz",
# "trg": "europarl-v7.de-en.en",
# "src": "europarl-v7.de-en.de"}
]
_VAL_DATA_SOURCES = [
{"url": "http://data.statmt.org/wmt17/translation-task/dev.tgz",
"trg": "newstest2013.en",
"src": "newstest2013.de"}]
_TEST_DATA_SOURCES = [
{"url": "https://storage.googleapis.com/tf-perf-public/" \
"official_transformer/test_data/newstest2014.tgz",
"trg": "newstest2014.en",
"src": "newstest2014.de"}]
class TqdmUpTo(tqdm):
def update_to(self, b=1, bsize=1, tsize=None):
if tsize is not None:
self.total = tsize
self.update(b * bsize - self.n)
def file_exist(dir_name, file_name):
for sub_dir, _, files in os.walk(dir_name):
if file_name in files:
return os.path.join(sub_dir, file_name)
return None
def download_and_extract(download_dir, url, src_filename, trg_filename):
src_path = file_exist(download_dir, src_filename)
trg_path = file_exist(download_dir, trg_filename)
if src_path and trg_path:
sys.stderr.write(f"Already downloaded and extracted {url}.\n")
return src_path, trg_path
compressed_file = _download_file(download_dir, url)
sys.stderr.write(f"Extracting {compressed_file}.\n")
with tarfile.open(compressed_file, "r:gz") as corpus_tar:
corpus_tar.extractall(download_dir)
src_path = file_exist(download_dir, src_filename)
trg_path = file_exist(download_dir, trg_filename)
if src_path and trg_path:
return src_path, trg_path
raise OSError(f"Download/extraction failed for url {url} to path {download_dir}")
def _download_file(download_dir, url):
filename = url.split("/")[-1]
if file_exist(download_dir, filename):
sys.stderr.write(f"Already downloaded: {url} (at {filename}).\n")
else:
sys.stderr.write(f"Downloading from {url} to {filename}.\n")
with TqdmUpTo(unit='B', unit_scale=True, miniters=1, desc=filename) as t:
urllib.request.urlretrieve(url, filename=filename, reporthook=t.update_to)
return filename
def get_raw_files(raw_dir, sources):
raw_files = { "src": [], "trg": [], }
for d in sources:
src_file, trg_file = download_and_extract(raw_dir, d["url"], d["src"], d["trg"])
raw_files["src"].append(src_file)
raw_files["trg"].append(trg_file)
return raw_files
def mkdir_if_needed(dir_name):
if not os.path.isdir(dir_name):
os.makedirs(dir_name)
def compile_files(raw_dir, raw_files, prefix):
src_fpath = os.path.join(raw_dir, f"raw-{prefix}.src")
trg_fpath = os.path.join(raw_dir, f"raw-{prefix}.trg")
if os.path.isfile(src_fpath) and os.path.isfile(trg_fpath):
sys.stderr.write(f"Merged files found, skip the merging process.\n")
return src_fpath, trg_fpath
sys.stderr.write(f"Merge files into two files: {src_fpath} and {trg_fpath}.\n")
with open(src_fpath, 'w') as src_outf, open(trg_fpath, 'w') as trg_outf:
for src_inf, trg_inf in zip(raw_files['src'], raw_files['trg']):
sys.stderr.write(f' Input files: \n'\
f' - SRC: {src_inf}, and\n' \
f' - TRG: {trg_inf}.\n')
with open(src_inf, newline='\n') as src_inf, open(trg_inf, newline='\n') as trg_inf:
cntr = 0
for i, line in enumerate(src_inf):
cntr += 1
src_outf.write(line.replace('\r', ' ').strip() + '\n')
for j, line in enumerate(trg_inf):
cntr -= 1
trg_outf.write(line.replace('\r', ' ').strip() + '\n')
assert cntr == 0, 'Number of lines in two files are inconsistent.'
return src_fpath, trg_fpath
def encode_file(bpe, in_file, out_file):
sys.stderr.write(f"Read raw content from {in_file} and \n"\
f"Write encoded content to {out_file}\n")
with codecs.open(in_file, encoding='utf-8') as in_f:
with codecs.open(out_file, 'w', encoding='utf-8') as out_f:
for line in in_f:
out_f.write(bpe.process_line(line))
def encode_files(bpe, src_in_file, trg_in_file, data_dir, prefix):
src_out_file = os.path.join(data_dir, f"{prefix}.src")
trg_out_file = os.path.join(data_dir, f"{prefix}.trg")
if os.path.isfile(src_out_file) and os.path.isfile(trg_out_file):
sys.stderr.write(f"Encoded files found, skip the encoding process ...\n")
encode_file(bpe, src_in_file, src_out_file)
encode_file(bpe, trg_in_file, trg_out_file)
return src_out_file, trg_out_file
def main():
parser = argparse.ArgumentParser()
parser.add_argument('-raw_dir', required=True)
parser.add_argument('-data_dir', required=True)
parser.add_argument('-codes', required=True)
parser.add_argument('-save_data', required=True)
parser.add_argument('-prefix', required=True)
parser.add_argument('-max_len', type=int, default=100)
parser.add_argument('--symbols', '-s', type=int, default=32000, help="Vocabulary size")
parser.add_argument(
'--min-frequency', type=int, default=6, metavar='FREQ',
help='Stop if no symbol pair has frequency >= FREQ (default: %(default)s))')
parser.add_argument('--dict-input', action="store_true",
help="If set, input file is interpreted as a dictionary where each line contains a word-count pair")
parser.add_argument(
'--separator', type=str, default='@@', metavar='STR',
help="Separator between non-final subword units (default: '%(default)s'))")
parser.add_argument('--total-symbols', '-t', action="store_true")
opt = parser.parse_args()
# Create folder if needed.
mkdir_if_needed(opt.raw_dir)
mkdir_if_needed(opt.data_dir)
# Download and extract raw data.
raw_train = get_raw_files(opt.raw_dir, _TRAIN_DATA_SOURCES)
raw_val = get_raw_files(opt.raw_dir, _VAL_DATA_SOURCES)
raw_test = get_raw_files(opt.raw_dir, _TEST_DATA_SOURCES)
# Merge files into one......................
train_src, train_trg = compile_files(opt.raw_dir, raw_train, opt.prefix + '-train')
val_src, val_trg = compile_files(opt.raw_dir, raw_val, opt.prefix + '-val')
test_src, test_trg = compile_files(opt.raw_dir, raw_test, opt.prefix + '-test')
# Build up the code from training files if not exist
opt.codes = os.path.join(opt.data_dir, opt.codes)
if not os.path.isfile(opt.codes):
sys.stderr.write(f"Collect codes from training data and save to {opt.codes}.\n")
learn_bpe(raw_train['src'] + raw_train['trg'], opt.codes, opt.symbols, opt.min_frequency, True)
sys.stderr.write(f"BPE codes prepared.\n")
sys.stderr.write(f"Build up the tokenizer.\n")
with codecs.open(opt.codes, encoding='utf-8') as codes:
bpe = BPE(codes, separator=opt.separator)
sys.stderr.write(f"Encoding ...\n")
encode_files(bpe, train_src, train_trg, opt.data_dir, opt.prefix + '-train')
encode_files(bpe, val_src, val_trg, opt.data_dir, opt.prefix + '-val')
encode_files(bpe, test_src, test_trg, opt.data_dir, opt.prefix + '-test')
sys.stderr.write(f"Done.\n")
field = torchtext.data.Field(
tokenize=str.split,
lower=True,
pad_token=Constants.PAD_WORD,
init_token=Constants.BOS_WORD,
eos_token=Constants.EOS_WORD)
fields = (field, field)
MAX_LEN = opt.max_len
def filter_examples_with_length(x):
return len(vars(x)['src']) <= MAX_LEN and len(vars(x)['trg']) <= MAX_LEN
enc_train_files_prefix = opt.prefix + '-train'
train = TranslationDataset(
fields=fields,
path=os.path.join(opt.data_dir, enc_train_files_prefix),
exts=('.src', '.trg'),
filter_pred=filter_examples_with_length)
from itertools import chain
field.build_vocab(chain(train.src, train.trg), min_freq=2)
data = { 'settings': opt, 'vocab': field, }
opt.save_data = os.path.join(opt.data_dir, opt.save_data)
print('[Info] Dumping the processed data to pickle file', opt.save_data)
pickle.dump(data, open(opt.save_data, 'wb'))
def main_wo_bpe():
'''
Usage: python preprocess.py -lang_src de -lang_trg en -save_data multi30k_de_en.pkl -share_vocab
'''
spacy_support_langs = ['de', 'el', 'en', 'es', 'fr', 'it', 'lt', 'nb', 'nl', 'pt','en_core_web_sm','de_core_news_sm']#这里的后两个'en_core__web_sm'和'de_core_news_sm'是后加的
parser = argparse.ArgumentParser()
parser.add_argument('-lang_src', required=True, choices=spacy_support_langs)
parser.add_argument('-lang_trg', required=True, choices=spacy_support_langs)
parser.add_argument('-save_data', required=True)
parser.add_argument('-data_src', type=str, default=None)
parser.add_argument('-data_trg', type=str, default=None)
parser.add_argument('-max_len', type=int, default=100)
parser.add_argument('-min_word_count', type=int, default=3)
parser.add_argument('-keep_case', action='store_true')
parser.add_argument('-share_vocab', action='store_true')
#parser.add_argument('-ratio', '--train_valid_test_ratio', type=int, nargs=3, metavar=(8,1,1))
#parser.add_argument('-vocab', default=None)
opt = parser.parse_args()
assert not any([opt.data_src, opt.data_trg]), 'Custom data input is not support now.'
assert not any([opt.data_src, opt.data_trg]) or all([opt.data_src, opt.data_trg])
print(opt)
src_lang_model = spacy.load(opt.lang_src)
trg_lang_model = spacy.load(opt.lang_trg)
def tokenize_src(text):
return [tok.text for tok in src_lang_model.tokenizer(text)]
def tokenize_trg(text):
return [tok.text for tok in trg_lang_model.tokenizer(text)]
SRC = torchtext.data.Field(
tokenize=tokenize_src, lower=not opt.keep_case,
pad_token=Constants.PAD_WORD, init_token=Constants.BOS_WORD, eos_token=Constants.EOS_WORD)
TRG = torchtext.data.Field(
tokenize=tokenize_trg, lower=not opt.keep_case,
pad_token=Constants.PAD_WORD, init_token=Constants.BOS_WORD, eos_token=Constants.EOS_WORD)
MAX_LEN = opt.max_len
MIN_FREQ = opt.min_word_count
if not all([opt.data_src, opt.data_trg]):
assert {opt.lang_src, opt.lang_trg} == {'de_core_news_sm', 'en_core_web_sm'}#这里改过,原代码是{'de','en'}
else:
# Pack custom txt file into example datasets
raise NotImplementedError
def filter_examples_with_length(x):
return len(vars(x)['src']) <= MAX_LEN and len(vars(x)['trg']) <= MAX_LEN
train, val, test = torchtext.datasets.Multi30k.splits(
exts = ('.' + 'de', '.' + 'en'),#这里也改过,原代码是'.'+'opt.lang_src ' '.'+'opt.lang-trg'
fields = (SRC, TRG),
filter_pred=filter_examples_with_length)
SRC.build_vocab(train.src, min_freq=MIN_FREQ)
print('[Info] Get source language vocabulary size:', len(SRC.vocab))
TRG.build_vocab(train.trg, min_freq=MIN_FREQ)
print('[Info] Get target language vocabulary size:', len(TRG.vocab))
if opt.share_vocab:
print('[Info] Merging two vocabulary ...')
for w, _ in SRC.vocab.stoi.items():
# TODO: Also update the `freq`, although it is not likely to be used.
if w not in TRG.vocab.stoi:
TRG.vocab.stoi[w] = len(TRG.vocab.stoi)
TRG.vocab.itos = [None] * len(TRG.vocab.stoi)
for w, i in TRG.vocab.stoi.items():
TRG.vocab.itos[i] = w
SRC.vocab.stoi = TRG.vocab.stoi
SRC.vocab.itos = TRG.vocab.itos
print('[Info] Get merged vocabulary size:', len(TRG.vocab))
data = {
'settings': opt,
'vocab': {'src': SRC, 'trg': TRG},
'train': train.examples,
'valid': val.examples,
'test': test.examples}
print('[Info] Dumping the processed data to pickle file', opt.save_data)
pickle.dump(data, open(opt.save_data, 'wb'))
print('[Info] Finish!!!!')
if __name__ == '__main__':
main_wo_bpe()
#main()
在download spacy中的en和de时换成了en_core_web_sm和de_core_web_sm,然后对代码稍微改了一点,其他没有改过。不知道有没有影响。
尝试过把pickle换成dill,不行,尝试过在代码里找workers,没有。
真的卡很久了,想要解决掉这个问题,求帮忙看一下,感谢啦!
看日志的提示,是在IO操作的时候
我有点怀疑是不是没有操作权限导致报错?
1、运行代码的用户没有系统的IO权限;
2、你读取的数据,没有权限,
可以从这2个方面去看看
具体是哪一句报错啊,报错信息不给全。
这个报错一般是对象错误,比如打开一个文件路径,你变成一个二进制流之类的